Publications

Döweler, F., Fransson, J. E. S., & Bader, M. K.-F. (2024). Linking high-resolution UAV-based remote sensing data to long-term vegetation sampling—a novel workflow to study slow ecotone dynamics. Remote Sensing, 16(5), 840.

Rose, K. A., Holsman, K., Nye, J. A., Markowitz, E. H., Banha, T. N. S., Bueno-Pardo, J., … others. (2024). Advancing bioenergetics-based modeling to improve climate change projections of marine ecosystems. Marine Ecology Progress Series, 732, 193–221. Retrieved from https://www.int-res.com/articles/meps_oa/m732p193.pdf

Borrelle, S., Jones, H., Richard, Y., & Salguero-Gomez, R. (2023). Estimating the impact of marine threats to seabird recovery after predator eradication. Marine Ornithology, 51(2), 225–236.

Richardson, L. E., Heenan, A., Delargy, A. J., Neubauer, P., Lecky, J., Gove, J. M., … Williams, G. J. (2023). Local human impacts disrupt depth-dependent zonation of tropical reef fish communities. Nature Ecology & Evolution, 7(11), 1844–1855. Retrieved from https://www.nature.com/articles/s41559-023-02201-x

Harrison, C. S., Rohr, T., DuVivier, A., Maroon, E. A., Bachman, S., Bardeen, C. G., … others. (2022). A new ocean state after nuclear war. AGU Advances, 3(4), e2021AV000610.

Pérez-Matus, A., Neubauer, P., Shima, J. S., & Rivadeneira, M. M. (2022). Reef fish diversity across the temperate south Pacific Ocean. Frontiers in Ecology and Evolution, 10, 768707. Retrieved from https://www.frontiersin.org/journals/ecology-and-evolution/articles/10.3389/fevo.2022.768707/full

Armstrong, D. P., Boulton, R. L., McArthur, N., Govella, S., Gorman, N., Pike, R., & Richard, Y. (2021). Using experimental reintroductions to resolve the roles of habitat quality and metapopulation dynamics on patch occupancy in fragmented landscapes. Conservation Biology, Published online, 1 October 2021.

Whitney, J. L., Gove, J. M., McManus, M. A., Smith, K. A., Neubauer, P., Phipps, J. E., … Asner, G. P. (2021). Surface slicks are pelagic nurseries for diverse ocean fauna. Scientific Reports, 11, 3197.

Calcott, B., Pocheville, A., & Griffiths, P. (2020). Signals that make a difference. The British Journal for the Philosophy of Science, 71(1), 233–258. Retrieved from https://www.dropbox.com/s/jegvktibdt0ljje/Calcott_et_al_2017_Signals_that_Make_a_Difference.pdf?dl=0

Carneiro, A. P., Pearmain, E. J., Oppel, S., Clay, T. A., Phillips, R. A., Bonnet-Lebrun, A.-S., … others. (2020). A framework for mapping the distribution of seabirds by integrating tracking, demography and phenology. Journal of Applied Ecology, 57, 514–525.

Leduc, D., Nodder, S. D., Rowden, A. A., Gibbs, M., Berkenbusch, K., Wood, A., … others. (2020). Structure of infaunal communities in New Zealand submarine canyons is linked to origins of sediment organic matter. Limnology and Oceanography, 65, 2303–2327.

Moses, C. (2020). The integrated data infrastructure. Te hanganga o ngā raraunga kōmitimiti me te whakaaetanga ā-iwi. In Chen, A. (ed.) Shouting zeros and ones (pp. 35–43). New Zealand: BWB Bridget Williams Books.

Calcott, B. (2019). Further clarification on permissive and instructive causes. Biology & Philosophy, 34(5), 50. Retrieved from https://www.dropbox.com/s/18ak6om2g5p0rpw/Calcott_2019_Further_Clarification_on_the_Permissive_instructive.pdf?dl=0

Gove, J. M., Jamison, M., Whitney, J. L., McManus, M. A., Lecky, J., Carvalho, F. C., … others. (2019). Prey-size plastics are invading larval fish nurseries. Proceedings of the National Academy of Sciences, 116(48), 24143–24149.

Neubauer, P., & Andersen, K. H. (2019). Thermal performance of fish is explained by an interplay between physiology, behaviour, and ecology. Conservation Physiology, 7, 1–14.

E. Abraham. (2018). Cadmium in New Zealand agricultural soils. New Zealand Journal of Agricultural Research, 1–6. doi:10.1080/00288233.2018.1547320

Neubauer, P., Thorson, J. T., Melnychuk, M. C., Methot, R., & Blackhart, K. (2018). Drivers and rates of stock assessments in the United States. PloS One, 13(5), e0196483. Retrieved from https://doi.org/10.1371/journal.pone.0196483

Parke, E. C., Calcott, B., & O’Malley, M. A. (2018). A cautionary note for claims about the microbiome’s impact on the ”self”. PLoS Biology, 16(9), e2006654.

Young, T., Pincin, J., Neubauer, P., Ortega-García, S., & Jensen, O. P. (2018). Investigating diet patterns of highly mobile marine predators using stomach contents, stable isotope, and fatty acid analyses. ICES Journal of Marine Science, fsy025. Retrieved from https://doi.org/10.1093/icesjms/fsy025

Calcott, B. (2017). Causal specificity and the instructive–permissive distinction. Biology & Philosophy, 32(4), 481–505. Retrieved from https://www.dropbox.com/s/gpl3tm88rcnmqwj/Calcott_2017_Causal_specificity_and_the_instructive_permissive_distinction_.pdf?dl=0

Lanfear, R., Frandsen, P. B., Wright, A. M., Senfeld, T., & Calcott, B. (2017). PartitionFinder 2: new methods for selecting partitioned models of evolution for molecular and morphological phylogenetic analyses. Molecular Biology and Evolution, 34(3), 772–773.

Neubauer, E.-F., Poole, A. Z., Neubauer, P., Detournay, O., Tan, K., Davy, S. K., & Weis, V. M. (2017). A diverse host thrombospondin-type-1 repeat protein repertoire promotes symbiont colonization during establishment of cnidarian-dinoflagellate symbiosis. eLife, e24494. doi:10.7554/eLife.24494

Menzies, I. J., Youard, L. W., Lord, J. M., Carpenter, K. L., Klink, J. W. van, Perry, N. B., … Gould, K. S. (2016). Leaf colour polymorphisms: A balance between plant defence and photosynthesis. Journal of Ecology, 104(1), 104–113.

Rosli, N., Leduc, D., Rowden, A. A., Clark, M. R., Probert, P. K., Berkenbusch, K., & Neira, C. (2016). Differences in meiofauna communities with sediment depth are greater than habitat effects on the New Zealand continental margin: implications for vulnerability to anthropogenic disturbance. PeerJ, 4, e2154. doi:10.7717/peerj.2154

Abraham, E. R., & Neubauer, P. (2015). Relationship between small-scale catch-per-unit-effort and abundance in New Zealand abalone (pāua, Haliotis iris) fisheries. PeerJ Preprints, 3, e1733. doi:10.7287/peerj.preprints.1388v2

Calcott, B., Levy, A., Siegal, M. L., Soyer, O. S., & Wagner, A. (2015). Engineering and biology: Counsel for a continued relationship. Biological Theory, 10(1), 50–59. Retrieved from https://www.dropbox.com/s/r8ddohae94kku9v/Calcott_et_al_2015_Engineering_and_Biology.pdf?dl=0

Frandsen, P. B., Calcott, B., Mayer, C., & Lanfear, R. (2015). Automatic selection of partitioning schemes for phylogenetic analyses using iterative k-means clustering of site rates. BMC Evolutionary Biology, 15(1), 1–17. Retrieved from https://www.dropbox.com/s/2f5hxvqptkp2ulj/Frandsen_et_al_2015_Automatic_Selection_of_Partitioning_Schemes_for_Phylogenetic_Analyses_Using.pdf?dl=0

Griffiths, P. E., Pocheville, A., Calcott, B., Stotz, K., Kim, H., & Knight, R. (2015). Measuring causal specificity. Philosophy of Science, 82(4), 529–555. Retrieved from https://www.dropbox.com/s/99ciaghms6ptzx5/Griffiths_et_al_2015_Measuring_Causal_Specificity.pdf?dl=0

Görlitz, S., Berkenbusch, K., & Probert, P. K. (2015). Lugworm (Abarenicola affinis) in seagrass and unvegetated habitats. Helgoland Marine Research, 69, 159–168. doi:10.1007/s10152-014-0424-1

Neubauer, P., & Jensen, O. P. (2015). Bayesian estimation of predator diet composition from fatty acids and stable isotopes. PeerJ, 3, e920. doi:10.7717/peerj.920

Payne, M. R., Barange, M., Cheung, W. W. L., Mackenzie, B. R., Batchelder, H. P., Cormon, X., … Paula, J. R. (2015). Uncertainties in projecting climate change impacts in marine ecosystems. ICES Journal of Marine Science, 73, 1272–1282. Retrieved from https://doi.org/10.1093/icesjms/fsv231

Richard, Y., Perriman, L., Lalas, C., & Abraham, E. R. (2015). Demographic rates of northern royal albatross at Taiaroa Head, New Zealand. PeerJ, 3, e906. doi:10.7717/peerj.906

Armstrong, D. P., Gorman, N., Pike, R., Kreigenhofer, B., McArthur, N., Govella, S., … Richard, Y. (2014). Strategic rat control for restoring populations of native species in forest fragments. Conservation Biology, 28(3), 713–723. doi:10.1111/cobi.12256

Calcott, B. (2014). The creation and reuse of information in gene regulatory networks. Philosophy of Science, 81(5), 879–890. Retrieved from https://www.dropbox.com/s/jym9r3mkqkzpi5r/Calcott_2014_The_Creation_and_Reuse_of_Information_in_Gene_Regulatory_Networks.pdf?dl=0

Leduc, D., Nodder, S. D., Berkenbusch, K., & Rowden, A. A. (2014). Effect of core surface area and sediment depth on estimates of deep-sea nematode genus richness and community structure. Marine Biodiversity, 45, 349–356.

Bellier, E., Neubauer, P., Monestiez, P., Letourneur, Y., Ledireach, L., Bonhomme, P., & Bachet, F. (2013). Marine reserve spillover: Modelling from multiple data sources. Ecological Informatics, 18, 188–193. doi:10.1016/j.ecoinf.2013.09.004

Görlitz, S., Berkenbusch, K., & Probert, P. K. (2013). Distribution and abundance of Abarenicola affinis (Arenicolidae, Polychaeta) in tidal inlets of Otago, New Zealand. New Zealand Journal of Marine and Freshwater Research, 47, 548–560. doi:10.1080/00288330.2013.815641

Leduc, D., Rowden, A. A., Nodder, S. D., Berkenbusch, K., Probert, P. K., & Hadfield, M. G. (2013). Unusually high food availability in Kaikoura Canyon linked to distinct deep-sea nematode community. Deep Sea Research Part II: Topical Studies in Oceanography. doi:10.1016/j.dsr2.2013.06.003

Neubauer, P., Jensen, O. P., Hutchings, J. A., & Baum, J. K. (2013). Resilience and recovery of overexploited marine populations. Science, 340(6130), 347–349. doi:10.1126/science.1230441

Neubauer, P., Shima, J. S., & Swearer, S. E. (2013). Inferring dispersal and migrations from incomplete geochemical baselines: Analysis of population structure using Bayesian infinite mixture models. Methods in Ecology and Evolution, 4(9), 836–845. doi:10.1111/2041-210X.12076

Thompson, F. N., Abraham, E. R., & Berkenbusch, K. (2013). Common dolphin (Delphinus delphis) bycatch in New Zealand commercial trawl fisheries. PLoS ONE, 8, e64438. doi:10.1371/journal.pone.0064438

Cooney, L. J., Klink, J. W. V., Hughes, N. M., Perry, N. B., Schaefer, H. M., Menzies, I. J., & Gould, K. S. (2012). Red leaf margins indicate increased polygodial content and function as visual signals to reduce herbivory in Pseudowintera colorata. New Phytologist, 194(2), 488–497.

Pierre, J. P., Abraham, E. R., Cleal, J., & Middleton, D. A. J. (2012). Reducing effects of trawl fishing on seabirds by limiting foraging opportunities provided by fishery waste. Emu, 112(3), 244–254. doi:10.1071/MU12002

Pierre, J. P., Abraham, E. R., Richard, Y., Cleal, J., & Middleton, D. A. J. (2012). Controlling trawler waste discharge to reduce seabird mortality. Fisheries Research, 131–133, 30–38. doi:10.1016/j.fishres.2012.07.005

Waugh, S. M., Filippi, D. P., Kirby, D. S., Abraham, E., & Walker, N. (2012). Ecological Risk Assessment for seabird interactions in Western and Central Pacific longline fisheries. Marine Policy, 36(4), 933–946. doi:10.1016/j.marpol.2011.11.005

Berkenbusch, K., Probert, P. K., & Nodder, S. D. (2011). Comparative biomass of sediment benthos across a depth transect, Chatham Rise, southwest Pacific Ocean. Marine Ecology Progress Series, 425, 79–90. doi:10.3354/meps09014

Guitierrez, J. L., Jones, C. G., Byers, J. E., Arkema, K. K., Berkenbusch, K., Commito, J. A., … Hendricks, I. E. (2011). Physical ecosystem engineers and the functioning of estuaries and coasts. In E. Wolanski & D. McLusky (Eds.), Treatise on estuarine and coastal science (pp. 53–81). Amsterdam: Elsevier. doi:10.1016/B978-0-12-374711-2.00705-1

Harvey, M., Law, C., Smith, M., Hall, J., Abraham, E., Stevens, C., … others. (2011). The SOLAS air–sea gas exchange experiment (SAGE) 2004. Deep Sea Research Part II: Topical Studies in Oceanography, 58(6), 753–763. doi:10.1016/j.dsr2.2010.10.015

Boulton, R. L., Richard, Y., & Armstrong, D. P. (2010). The effect of male incubation feeding, food and temperature on the incubation behaviour of New Zealand robins. Ethology, 116(6), 490–497. doi:10.1111/j.1439-0310.2010.01759.x

Leduc, D., Probert, P. K., Berkenbusch, K., Nodder, S. D., & Pilditch, C. A. (2010). Abundance of small individuals influences the effectiveness of processing techniques for deep-sea nematodes. Deep Sea Research Part I: Oceanographic Research Papers, 57, 1363–1371. doi:10.1016/j.dsr.2010.07.002

Menzies, I. J., & Burns, K. (2010). Temporal shifts in the pair-bond dynamics of New Zealand robins (Petroica australis). New Zealand Journal of Ecology, 265–268.

Morgan, K., McArthur, N., Johnston, R., Richard, Y., & Armstrong, D. P. (2010). Using translocation of North Island robins to counter effects of forest fragmentation in the central North Island of New Zealand. In P. S. Soorae (Ed.), Global re-introduction perspectives: Re-introduction case-studies from around the globe (pp. 116–120). Abu Dhabi, UAE: IUCN/SSC Re-introduction Specialist Group.

Neubauer, P., Shima, J. S., & Swearer, S. E. (2010). Scale-dependent variability in Forsterygion lapillum hatchling otolith chemistry: implications and solutions for studies of population connectivity. Marine Ecology Progress Series, 415, 263–274. doi:10.3354/meps08741

Pierre, J. P., Abraham, E. R., Middleton, D. A. J., Cleal, J., Bird, R., Walker, N. A., & Waugh, S. M. (2010). Reducing interactions between seabirds and trawl fisheries: Responses to foraging patches provided by fish waste batches. Biological Conservation, 143, 2779–2788. doi:10.1016/j.biocon.2010.07.026

Richard, Y., & Armstrong, D. P. (2010). Cost distance modelling of landscape connectivity and gap-crossing ability using radio-tracking data. Journal of Applied Ecology, 47(3), 603–610. doi:10.1111/j.1365-2664.2010.01806.x

Richard, Y., & Armstrong, D. P. (2010). The importance of integrating landscape ecology in habitat models: Isolation-driven occurrence of north island robins in a fragmented landscape. Landscape Ecology, 25, 1363–1374. doi:10.1007/s10980-010-9488-8

Abraham, E. R., Pierre, J. P., Middleton, D. A. J., Cleal, J., Walker, N. A., & Waugh, S. M. (2009). Effectiveness of fish waste management strategies in reducing seabird attendance at a trawl vessel. Fisheries Research, 95(2-3), 210–219. doi:10.1016/j.fishres.2008.08.014

Lewis, R. M., Armstrong, D. P., Joy, M. K., Richard, Y., Ravine, D., Berggren, A., & Boulton, R. L. (2009). Using artificial nests to predict nest survival at reintroduction sites. New Zealand Journal of Ecology, 33, 40–51. Retrieved from http://www.jstor.org/stable/24060861

Mills, V. S., & Berkenbusch, K. (2009). Seagrass (Zostera muelleri) patch size and spatial location influence infaunal macroinvertebrate assemblages. Estuarine, Coastal and Shelf Science, 81, 123–129. doi:10.1016/j.ecss.2008.10.005

Mongin, M., Abraham, E., & Trull, T. (2009). Winter advection of iron can explain the summer phytoplankton bloom that extends 1000 km downstream of the Kerguelen Plateau in the Southern Ocean. Journal of Marine Research, 67, 225–237. doi:10.1357/002224009789051218

Armstrong, D. P., Richard, Y., Ewen, J. G., & Dimond, W. J. (2008). Avoiding hasty conclusions about effects of habitat fragmentation. Avian Conservation and Ecology-Ecologie et Conservation Des Oiseaux, 3(1), 8. Retrieved from http://www.ace-eco.org/vol3/iss1/art8/

Boulton, R. L., Richard, Y., & Armstrong, D. P. (2008). Influence of food availability, predator density and forest fragmentation on nest survival of New Zealand robins. Biological Conservation, 141(2), 580–589. doi:10.1016/j.biocon.2007.12.007

Menzies, I. J., & Burns, K. C. (2008). Food hoarding in the New Zealand robin: a review and synthesis. In Weber, E.A. and Krause, L.H. (eds.). Animal behaviour: new research (pp. 163–183). New York: Nova Science Publishers.

Waugh, D. W., & Abraham, E. R. (2008). Stirring in the global surface ocean. Geophysical Research Letters, 35(20), L20605. doi:10.1029/2008GL035526

Abraham, E. R. (2007). Sea-urchin feeding fronts. Ecological Complexity, 4, 161–168. doi:10.1016/j.ecocom.2007.06.001

Berkenbusch, K., & Rowden, A. A. (2007). An examination of the spatial and temporal generality of the influence of ecosystem engineers on the composition of associated assemblages. Aquatic Ecology, 41(1), 129–147. doi:10.1007/s10452-006-9053-3

Berkenbusch, K., Rowden, A. A., & Myers, T. E. (2007). Interactions between seagrasses and burrowing ghost shrimps and their influence on infaunal assemblages. Journal of Experimental Marine Biology and Ecology, 341, 70–84. doi:10.1016/j.jembe.2006.10.026

Bakker, D. C. E., Boyd, P. W., Abraham, E. R., Charette, M. A., Gall, M. P., Hall, J. A., … others. (2006). Matching carbon pools and fluxes for the Southern Ocean Iron Release Experiment (SOIREE). Deep-Sea Research Part I, 53(12), 1941–1960. doi:10.1016/j.dsr.2006.08.014

Grove, S. L., Probert, P. K., Berkenbusch, K. K., & Nodder, S. D. (2006). Distribution of bathyal meiofauna in the region of the Subtropical Front, Chatham Rise, south-west Pacific. Journal of Experimental Marine Biology and Ecology, 330, 342–355. doi:10.1016/j.jembe.2005.12.038

Law, C., Crawford, W., Smith, M., Boyd, P., Wong, C., Nojiri, Y., … others. (2006). Patch evolution and the biogeochemical impact of entrainment during an iron fertilisation experiment in the sub-Arctic Pacific. Deep-Sea Research Part II, 53(20-22), 2012–2033. doi:10.1016/j.dsr2.2006.05.028

MacDiarmid, A., Abraham, E., McKenzie, A., Dolan, T., Goodrich, M., & Butler, M. (2006). Individual based, spatially explicit models to explore the mating systems of the red rock lobster Jasus edwardsii and the Caribbean spiny lobster Panulirus argus. The Lobster Newsletter, 19(1), 8–9. Retrieved from http://www.fish.wa.gov.au/Documents/rock_lobster/the_lobster_newsletter/lobster_newsletter_v19_no1.pdf

Waugh, D. W., Abraham, E. R., & Bowen, M. M. (2006). Spatial variations of stirring in the surface ocean: A case study of the Tasman Sea. Journal of Physical Oceanography, 36(3), 526–542. doi:10.1175/JPO2865.1

Law, C., Abraham, E., Woodward, E., Liddicoat, M., Fileman, T., Thingstad, T., … Zohary, T. (2005). The fate of phosphate in an in situ Lagrangian addition experiment in the Eastern Mediterranean. Deep-Sea Research Part II, 52(22-23), 2911–2927. doi:10.1016/j.dsr2.2005.08.017

Stevens, C. L., Abraham, E. R., Moore, C. M., Boyd, P. W., & Sharples, J. (2005). Observations of small-scale processes associated with the internal tide encountering an island. Journal of Physical Oceanography, 35(9), 1553–1567.

Boyd, P. W., Law, C. S., Wong, C., Nojiri, Y., Tsuda, A., Levasseur, M., … others. (2004). The decline and fate of an iron-induced subarctic phytoplankton bloom. Nature, 428(6982), 549–553. doi:10.1038/nature02437

Frean, M. R., & Abraham, E. R. (2004). Adaptation and enslavement in endosymbiont-host associations. Physical Review E, 69(5), 051913 (6 pages). doi:10.1103/PhysRevE.69.051913

Lohrer, A. M., Thrush, S. F., Hewitt, J. E., Berkenbusch, K., Ahrens, M., & Cummings, V. J. (2004). Terrestrially derived sediment: response of marine macrobenthic communities to thin terrigenous deposits. Marine Ecology Progress Series, 273, 121–138. doi:10.3354/meps273121

Berkenbusch, K., & Rowden, A. A. (2003). Ecosystem engineering – moving away from “just-so” stories. New Zealand Journal of Ecology, 27, 67–73. Retrieved from http://www.jstor.org/stable/24058163

Law, C., Abraham, E., Watson, A., & Liddicoat, M. (2003). Vertical eddy diffusion and nutrient supply to the surface mixed layer of the Antarctic Circumpolar Current. Journal of Geophysical Research, 108, 3272. doi:0.1029/2002JC001604

Moore, C. M., Suggett, D., Holligan, P. M., Sharples, J., Abraham, E. R., Lucas, M. I., … Hydes, D. J. (2003). Physical controls on phytoplankton physiology and production at a shelf sea front: a fast repetition-rate fluorometer based field study. Marine Ecology Progress Series, 259, 29–45. doi:10.3354/meps259029

Abraham, E. R., & Bowen, M. M. (2002). Chaotic stirring by a mesoscale surface-ocean flow. Chaos: An Interdisciplinary Journal of Nonlinear Science, 12, 373. doi:10.1063/1.1481615

Abraham, E. R. (2001). The fractal branching of an arborescent sponge. Marine Biology, 138(3), 503–510. doi:10.1007/s002270000479

Abraham, E. R. (2001). The branching sponge Raspailia inaequalis. In Kaandorp, J. and Kübler, J. (eds.) The algorithmic beauty of seaweeds, sponges and corals (pp. 34–38). Berlin: Springer.

Abraham, E. R. (2001). A Laplacian model of branching growth. In Kaandorp, J. and Kübler, J. (eds.) The algorithmic beauty of seaweeds, sponges and corals (pp. 109–113). Berlin: Springer.

Abraham, E. R. (2001). Morphological analysis of a branching sponge. In Kaandorp, J. and Kübler, J. (eds.) The algorithmic beauty of seaweeds, sponges and corals (pp. 72–75). Berlin: Springer.

Boyd, P., & Abraham, E. (2001). Iron-mediated changes in phytoplankton photosynthetic competence during SOIREE. Deep-Sea Research Part II, 48(11-12), 2529–2550. doi:10.1038/35037500

Frean, M., & Abraham, E. R. (2001). Rock-scissors-paper and the survival of the weakest. Proceedings of the Royal Society B: Biological Sciences, 268(1474), 1323–1327. doi:10.1098/rspb.2001.1670

Frean, M., & Abraham, E. (2001). A voter model of the spatial prisoner’s dilemma. IEEE Transactions on Evolutionary Computation, 5(2), 117–121. doi:10.1109/4235.918432

Sharples, J., Moore, C. M., & Abraham, E. R. (2001). Internal tide dissipation, mixing, and vertical nitrate flux at the shelf edge of NE New Zealand. Journal of Geophysical Research, 106(C7), 14069–14081. doi:10.1029/2000JC000604

Trull, T., Rintoul, S. R., Hadfield, M., & Abraham, E. R. (2001). Circulation and seasonal evolution of polar waters south of Australia: implications for iron fertilization of the Southern Ocean. Deep-Sea Research Part II, 48(11-12), 2439–2466. doi:10.1016/S0967-0645(01)00003-0

Abraham, E. R., Law, C. S., Boyd, P. W., Lavender, S. J., Maldonado, M. T., & Bowie, A. R. (2000). Importance of stirring in the development of an iron-fertilized phytoplankton bloom. Nature, 407(6805), 727–730. doi:10.1038/35037555

Berkenbusch, K., & Rowden, A. A. (2000). Intraspecific burrow plasticity of an intertidal population of Callianassa filholi (Crustacea: Decapoda: Thalassinidea) in relation to environmental conditions. New Zealand Journal of Marine and Freshwater Research, 34(3), 397–408. doi:10.1080/00288330.2000.9516943

Berkenbusch, K., & Rowden, A. A. (2000). Latitudinal variation in the reproductive biology of the burrowing ghost shrimp Callianassa filholi (Decapoda: Thalassinidea). Marine Biology, 136, 497–504. doi:10.1007/s002270050709

Berkenbusch, K., Rowden, A. A., & Probert, P. K. (2000). Temporal and spatial variation in macrofauna community composition imposed by ghost shrimp Callianassa filholi bioturbation. Marine Ecology Progress Series, 192, 249–257. doi:10.3354/meps192249

Boyd, P. W., Watson, A. J., Law, C. S., Abraham, E. R., Trull, T., Murdoch, R., … others. (2000). A mesoscale phytoplankton bloom in the polar Southern Ocean stimulated by iron fertilization. Nature, 407, 695–702. doi:10.1038/35037500

Berkenbusch, K., & Rowden, A. A. (1999). Factors influencing sediment turnover by the burrowing ghost shrimp Callianassa filholi (Decapoda: Thalassinidea). Journal of Experimental Marine Biology and Ecology, 238(2), 283–292. doi:10.1016/S0022-0981(99)00019-2

Abraham, E. (1998). The generation of plankton patchiness by turbulent stirring. Nature, 391(6667), 577–580. doi:10.1038/35361

Berkenbusch, K., & Rowden, A. A. (1998). Population dynamics of the burrowing ghost shrimp Callianassa filholi on an intertidal sandflat in New Zealand (Decapoda: Thalassinidea). Ophelia, 49, 55–69. doi:10.1080/00785326.1998.10409373

Abraham, E. R. C. (1997). Seiche modes of Wellington Harbour, New Zealand. New Zealand Journal of Marine and Freshwater Research, 31(2), 191–200. doi:10.1080/00288330.1997.9516758

Abraham, E. (1992). Non-linear sigma models and their Q-lump solutions. Physics Letters B, 278(3), 291–296. doi:10.1016/0370-2693(92)90195-A

Abraham, E., & Townsend, P. (1992). More on Q-kinks: a (1+1)-dimensional analogue of dyons. Physics Letters B, 295(3-4), 225–232. doi:10.1016/0370-2693(92)91558-Q

Abraham, E., & Townsend, P. (1992). Q-kinks. Physics Letters B, 291(1-2), 85–88. doi:10.1016/0370-2693(92)90122-K

Abraham, E., & Townsend, P. (1991). Intersecting extended objects in supersymmetric field theories. Nuclear Physics. B, 351(1-2), 313–332. doi:10.1016/0550-3213(91)90093-D

Abraham, E., Townsend, P., & Howe, P. S. (1989). Space-time versus world surface conformal invariance for particles, strings and membranes. Classical and Quantum Gravity, 6(11), 1541–1546. doi:10.1088/0264-9381/6/11/009